Swiss Light-sheet Microscopy Workshop 24-25 Apr 2019
Irchel Campus, UZH Zürich

The aim of the event is to strengthen the local and international network and facilitate the exchange of ideas between the lightsheet users and developers.

Speakers:

Kishan Dholakia University of St. Andrews
Jan Huisken MIR, Madison
Lars Hufnagel EMBL, Heidelberg
Florian Jug MPI-MCBG, Dresden
Daniel Kirschenbaum USZ, Zurich
Prisca Liberali FMI, Basel
Christian Mosimann UZH, Zurich
Stéphane Pagès Wyss Center, Geneva
Francesca Peri UZH, Zurich
Paola Perin University of Pavia
Stefan Preibisch MDC, Berlin
Nicolas Renier ICM, Paris
Raju Tomer Columbia University, New York
Fabian Voigt UZH, Zurich

Day 1 - 24 April 2019

New technology developments in lightsheet microscopy • The latest applications in lightsheet microscopy • Sample preparation including clearing techniques and immunolabelling • Data visualization and analysis • New approaches in post-processing

09h00

Registration – coffee and croissants

10h00

Welcome

Fritjof Helmchen, Brain Research Institute, UZH

Urs Ziegler, Center for Microscopy and Image Analysis, UZH

Morning Session

Chair: TBA

10h10

Kishan Dholakia: TBA

University of St. Andrews

10h30

Talk selected from abstract

 

10h45

Prisca Liberali: Self-organization in intestinal organoid development

FMI, Basel

11h05

Talk selected from abstract

 

11h20

Keynote lecture

Raju Tomer: TBA

Columbia University

12h00

Lunch - Poster session – Company Exhibitions - Y-Lichthof

Afternoon session

Chair: TBA

14h00

Francesca Peri: TBA

IMLS. UZH

14h20

Daniel Kirchenbaum: TBA

USZ

14h35

Talk selected from abstract

 

14h50

Keynote lecture

Nicolas Renier: TBA

ICM - Brain and Spine Institute, Paris

15h30

Coffee break and networking - Y-Lichthof

Afternoon session: Post-processing and data analysis

Chair: TBA

16h00

Stephan Preibisch: BigStitcher: Reconstructing high-resolution image datasets of cleared and expanded samples

Delbrück Zenrum, Berlin

16h20

TBA

Application talk (Arivis)

16h35

Florian Jug: Content-Aware Image Restoration for Light and Electron Microscopy

MPI, Dresden

16h55

Wine & Cheesse - Poster session - Company Exhibition

 

Day 2 - 25 April 2019

New technology developments and the latest applications in lightsheet microscopy • Company presentations • Hands-on sessions and practical demonstrations with the custom lightsheet microscope developed by Fabian Voigt • Demonstrations of virtual reality visualization of lightsheet data

Morning Session

Chair: TBA

09h00

Lars Hufnagel: TBA

EMBL, Heidelberg

09h20

Fabian Voigt: The mesoSPIM Initative

HIFO, UZH

09h40

Talk selected from abstract

 

09h55

Paola Perin: Three-dimensional imaging and segmentation of the rat choroid plexus

University of Pavia

10h15

Stéphane Pagès

Wyss Center, Geneva

10h35

Cofee break and networking – Y-Lichthof

11h00

Talk selected from abstract

 

11h15

 

Imaris Bitplane

11h30

Christian Mosimann: TBA

IMLS, UZH

11h50

Keynote lecture

Jan Huisken: Flamingo: a customizable and shareable light sheet microscope

Morgridge Institute for Research, Madison

12h30

Lunch - Poster Session - Company Exhibitions

Afternoon session

 

13h30

Mathias Pasche-Drews: Advances in back-illuminated Scientific CMOS technology.

Photometrics

13h45

Peter Zehetmayer

Acquifer

14h00

Oliver Bauhofer: X-CLARITY Tissue Clearing System: Accelerate your tissue clearing without loosing structure or function.

Bucher

14h15

TBA

Arivis

14h30

TBA

Omicron

14h45

Michael Desert, Pierre-Yves Burgi: Solution for high compression rate, efficient transfer and archiving of light sheet microscopy imaging.

Dotphoton, Geneva University

15h00

Dieter Goehlmann: Imaris Solutions for Big Data

Bitplane

15h15

Coffee break and networking

14h00

Company talks

Zeiss

16h30 

Time reserved for demos by companies

 

Hands-on sessions on different lightsheet microscopes can be booked for the 26 April.