Spatial Biology Tools
Image Processing and Data Analysis Support
While we support you in data generation using the technologies described, our support in analyzing the data is limited to initial primary analysis. If your group lacks bioinformatic competence, we highly recommend you to contact our experts at imageprocessing@zmb.uzh.ch for further support on downstream analysis, visualization, and integration of spatial datasets at an early stage of the project.
A custom image processing pipeline for stitching and registering raw images (acquired at the MD ImagXpress) can be found at:https://github.com/ZMB-UZH/zmb-ibex-jove
Make sure to acknowledge the Center for Microscopy and Image Analysis in your publication to support us.
How to acknowledge contributions of the Center for Microscopy and Image Analysis